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Dynamical properties of bovine pancreatic trypsin inhibitor from a molecular dynamics simulation at 5000 atm
[摘要]

Molecular dynamics simulations of bovine pancreatic trypsin inhibitor in water have been performed with coupling to pressure baths at 1 atm and at 5000 atm. The positional fluctuations of atoms in the α- and γ-positions are slightly decreased at 5000 atm. The mobility of the backbone φ-and ψ-angles is not affected with respect to the root mean square fluctuations and the rate of torsional angle transitions. The amplitude of libration of sidechain χ-angles remains nearly the same for both pressures, but the rate of torsional angle transitions decreases on average by 30% when increasing the hydrostatic pressure to 5000 atm.

[发布日期]  [发布机构] 
[效力级别]  [学科分类] 生物化学/生物物理
[关键词] BPTI;Molecular dynamics;Hydrostatic pressure;Computer simulation;BPTI;bovine pancreatic trypsin inhibitor;MD;molecular dynamics;NMR;nuclear magnetic resonance;RMS;root mean square [时效性] 
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