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A one‐variable topographical descriptor for the β‐turns of peptides and proteins
[摘要]

The β-turn is a common secondary structure in biologically active peptides and globular proteins, where it is widely thought to serve as a molecular recognition site for many biological processes. Although the primary β-turn recognition requirements are thought to be straightforward, relating mainly to the relative positions of the peptide sidechains, current classifications of β-turns are complex and are based solely upon the very variable geometry of the peptide backbone. We demonstrate here that β-turns can be described in terms of a single dihedral angle, which we have called β, which provides a complete description of the spatial relationship between the entry and exit peptide bonds as well as the relative orientations of the intervening sidechains for any β-turn. This description should prove particularly useful in the development and application of novel peptide mimetic drugs, compounds for which a classification based on a peptide backbone geometry may be entirely irrelevant.

[发布日期]  [发布机构] 
[效力级别]  [学科分类] 生物化学/生物物理
[关键词] β-Turn classification;Molecular recognition;Peptide mimetic [时效性] 
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